Will Connell
@wilstcpredicting phenotypes 🖥🧬🔮 open to new opportunities; prev. @vevo_ai @keiser_lab @invitae
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🧬🔮 Single cell foundation models have been a recent hot topic in bio-ML! A few of the recent methods and some thoughts 🧬🔮 1) Geneformer 2) scGPT 3) scFoundation 4) Exceiver
Progress is only made on challenging modeling problems with honest, rigorous, evaluations⚡️
1/14 Excited to introduce PertEval-scFM! It provides benchmark and evaluation tools for perturbation effect prediction models, including single-cell foundation models (scFMs). Paper and GitHub link at the end of the thread! 🧵👇
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