Muaaz Awan
@MuaazGulWorks on #HPC #GPUs #Bioinformatics @NERSC @BerkeleyLab Views expressed here are my own and do not represent my employer.
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End of an era: After 7 years of service, thousands of user projects & billions of compute hours, @NERSC’s Cori supercomputer will be officially retired on May 31. Thank you for a great run! ow.ly/lzk450Oqkbf @BerkeleyLab @doescience @HPE_Cray #HPC
This is fabulous! Honored to be part of winning team for Gordon Bell Special Prize for COVID-19 research at #SC22 The first genome language models to predict variants of concern @arvindr_ @wn8_nie @yuntiandeng @ArashVahdat @ChaoweiX @sacdallago @nvidia @caltech @argonne_lcf
Alright, It's an honor for our team to be awarded the Gordon Bell Special Prize for COVID-19 research (2022) as part of #SC22!! Thanks to @AnimaAnandkumar @NVIDIAAI @CerebrasSystems and everyone on the team that made this possible!!
Congrats 🎉 @BerkeleyLab's @luc_vay, @axccl & @exascaleproject's Warp-X team on winning @TheOfficialACM's Gordon Bell prize! About their work: bit.ly/GBFinalists Podcast about #HPC contributions: bit.ly/WarpXecp @LBNLatap @NERSC @OLCFGOV @doescience @CEA_France
Thank you @BerkeleyLab for this kind 🧵 and sharing the memories from those exciting early days of the @molecularfndry, it is a privilege to be associated with such an impactful institution and so many great scientists 👩🔬
CONGRATULATIONS to @CarolynBertozzi on winning the 2022 @NobelPrize in #Chemistry, from all of us here at Berkeley Lab! (Thread 1/15) @molecularfndry @UCB_Chemistry @UCBerkeley @doescience @ENERGY #NobelPrize newscenter.lbl.gov/2022/10/05/car…
Exciting work by Oguz, @aydoz and team! Proud to have been a part of this. All the best for the finale!
Here is the screenshot of finalists. Really excited about making a biological sequence based application a Gordon Bell finalist. Thanks to @ananth_k, @thesteinegger for support and @esaliya, @giuliaguidi, @kyrpides, @g_pavlopoulos, @KathyYelick, @MuaazGul for contributions.
In case you missed it in the #GTC22 keynote, @nvidia's new H100 will have dynamic programming instructions (DPX) built in. Every bioinformatician should realize what this means for aligners... blogs.nvidia.com/blog/2022/03/2…
Katherine Yelick Selected to Receive the 2022 CRA Distinguished Service Award cra.org/katherine-yeli…
Don't miss @KathyYelick's seminar on Genomic Analysis at Scale—registration needed (see below) ;)
First lecture: Katherine Yelick, U. of California Berkeley and LBNL: "Genomic Analysis at Scale: Mapping Irregular Computations to Advanced Architectures" on Dec 16, 1:00pm EST Information and registration is at siam.zoom.us/webinar/regist… 2/3
Both the Readers and Editors agree that the "Top #Supercomputing Achievement" @HPCWire award should go to the #Perlmutter #supercomputer @NERSC! Congratulations to all the folks @BerkeleyLab , @NERSC, @HPE_Cray, @AMD & @nvidia who worked on this! #SC21 #HPC #AI
Join me for our best paper award nominee talk on Tuesday! #SC21 #GPU #Bioinformatics #HPC
Metagenomic samples processed by modern sequencers yield large + complex datasets that require exascale-capable assemblers, but underlying algorithmic motifs are not suited for GPUs @BerkeleyLab's MetHipMer offers a solution ow.ly/hcT350GKWQR @exascaleproject #SC21 @jgi
This is an excellent opportunity for recent PhDs in computing to jump start their research careers. Alvarez alumni continue their research as faculty in academia (e,g., MIT, Berkeley, Penn State, Notre Dame), and as scientists at government and industry labs. Please RT
Berkeley Lab is now accepting applications for the 2022 Luis W. Alvarez Postdoctoral Fellowship and the 2022 Admiral Grace Hopper Postdoctoral Fellowship in the Computing Sciences Area. Come join LBNL, and maybe my group. cs.lbl.gov/careers/comput…
Have questions about science, supercomputers, and our new Perlmutter system? Experts @ragerber @hpcgal @jdeslip_hpc @glennklockwood & @dch3njw have answers! Join our Twitter chat w/@HPE_Cray @NERSC & @NVIDIAHPCDev July 1 at 9am PT. #AskPerlmutter #ISC21 @BerkeleyLab #HPC
Perlmutter at NERSC/LBNL at No 5 is highest ranked new system It also is #3 on HCG, #4 on HPL-AI and #6 on the Green500!
DYK #Perlmutter will quadruple the computational power currently @NERSC? The @HPE_Cray EX supercomputer—containing @nvidia A100 Tensor Core GPUs + 3rd Gen @AMD EPYC CPUs— will be among the world's fastest for simulation, analysis, and #AI. More: bit.ly/PRPerlmutter | #HPC
Did you know that @NERSC hosts a number of paid internships every summer for students? See all of our open positions: bit.ly/NERSCintern21 cc: @LBNLnext @BerkeleyLab @LBNLcs @doescience @ENERGY #HPC #AI #ML
ExaBiome project (sites.google.com/lbl.gov/exabio…) is looking for a postdoctoral fellow to work at @LBNLcs The postdoc will design parallel algorithms for bioinformatics, machine learning, or graph analytics, and implement them on GPUs and clusters with GPUs: m.rfer.us/LBLfh93Tf
🚨 In our new blog series, @NERSC engineers will be sharing insider details about how the facility is preparing for Perlmutter 🚨 First up: Jack Deslippe ( @jdeslip ) & Doug Jacobsen give a peek at the system's new GPU processors bit.ly/PerlmutterGPU @ENERGY @doescience #HPC
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