Cahan Lab | at JHMI
@cahanLabComputational & Experimental Stem Cell Biology. A member of the Department of Biomedical Engineering at Johns Hopkins University.
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Individual variation in the emergence of anterior-to-posterior neural fates from human pluripotent stem cells: Stem Cell Reports cell.com/stem-cell-repo…
PACNet quickly measures transcriptional fidelity of engineered cells from bulk data. Robust to exp method, it also compares yours to previously published data. Led by Emily Lo, with Dan Peng @Jvquez12 @MoEbrahimkhani @ChulanKwonLab See @stemcellreports dlvr.it/SsTwDJ
We are looking for new postdocs to join our team. Positions are fully funded and you can pursue your interest in technology development, biological questions, or understanding disease. jobrxiv.org/job/johns-hopk…
Congratulations to Dr. Emily Su on the defense of her thesis Computational Tools to Explore Cell Identity Transitions with Application to Cell Fate Engineering! Please remember us when you become famous!
Submit your research to Stem Cell Reports—the premier society journal for stem cell research and an open access forum communicating basic discoveries in stem cell research, in addition to translational and clinical studies @isscr @martinperajax hubs.li/Q01t6Bgt0
Friends, Im excited to share my work linking #GRNs with dynamic #signals via #agents. The #multiscale GARMEN showed how a master GRN can lead to different #tissue structures. We successfully tested signal and transcriptomic perturbation outcomes in vitro bit.ly/3T41hES
We are pleased to announce the call for papers for a new special issue on the clinical translation of PSCs, guest edited by Drs. Shinya Yamanaka and Kazuto Takayama of @CiRA_KU_E . To learn more and sumit - bit.ly/3V1AmLS. @ISSCR @martinperaJAX @CellPress
M Zamani @NganHuang & R Cheng @cahanlab @HopkinsMedicine ID-ed regulators of endothelial to mesenchymal transition. Exploring #Tgfb & substrate stiffness on #EndMT they found a Mesenchymal-to-endothelial reversion and linked populations to #atherosclerosis onlinelibrary.wiley.com/doi/10.1002/ad…
Single-cell papers that make the count matrices and cell type classifications easily available are 100% more likely to be cited by me. Cell type-specific signature genes are a bonus.
Four permanent posts in interdisciplinary research at the Living Systems Institute - uniting maths, physics, and biology. Apply here; lsi.exeter.ac.uk/join-us/jobs/
Entropy sorting of single cell RNA sequencing data reveals the inner cell mass in the human pre-implantation embryo biorxiv.org/content/10.110…
Two new pre-prints out today from Srivastava lab where we apply single cell chromatin accessibility and transcriptomics to define mechanisms underlying congenital heart defects arising from genetic and environmental perturbations, respectively. Mine: biorxiv.org/content/10.110…
Technician job @cahanlab Yes you will be underpaid. But you will gain wet/dry expertise with stem cells, genomic engineering, single cell and spatial omics, data science. Join a fun, dynamic, collaborative team developing algorithms to engineer cell fate. tinyurl.com/4yu3xnbr
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