busrasavas
@busrasavasPhD student IBG & DEU | Computational Structural Biologist
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It's one of those great moments when hard work pays off. Sleepless nights with the most self-motivated team ever!!💪💜 Waiting in huge excitement to be involved the next round of CAPRI, because once you become a CAPRI'ot and taste that adrenaline... 🫠🚀
Super proud to have been listed as one of the successful groups in predicting the structure of an antibody-peptide during @CAPRIdock 's 55th round! This was our first attempt in CAPRI as the Karaca team with @busrasavas @iremylmazbilek @atakanzsn 💪 Here is what we did ...
MassiveFold: unveiling AlphaFold’s hidden potential with optimized and parallelized massive sampling @NatComputSci 1. MassiveFold introduces an optimized, parallelized approach to enhance AlphaFold’s structure prediction, significantly reducing computational time for massive…
Here we describe our “mini aggressive sampling” approach, which brought us success in CAPRI55’s antibody-peptide target 🎯👇
Towards a greener AlphaFold2 protocol for protein complex modeling: Insights from CAPRI Round 55 biorxiv.org/cgi/content/sh… #biorxiv_bioinfo
Excited to share our latest research on de novo DNA methylation mediated by DNMT3A/B enzymes! @Ezgi_Karaca_ ✨ Check out how a single amino acid difference drives epigenetic selectivity. For more this thread👇& biorxiv.org/content/10.110…
Super proud to have been listed as one of the successful groups in predicting the structure of an antibody-peptide during @CAPRIdock 's 55th round! This was our first attempt in CAPRI as the Karaca team with @busrasavas @iremylmazbilek @atakanzsn 💪 Here is what we did ...
Amazing night with this brilliant group at the #EMBOComp3D workshop last night!! It's incredible to see how pa ssionate everyone is about this field 🎉Conversations were stimulating, the wine was flowing, and the willingness to share knowledge were infectious 🍾🧠 @EMBLEvents
🥂We recently celebrated 20 years of the protein-protein docking platform HADDOCK 🥂 Read Prof. Alexandre Bonvin's reflections on the journey: bit.ly/3Gw02uf @amjjbonvin #molecularmodeling
Fransa-Türkiye ikili işbirliği projemize STAR bursiyeri arıyoruz! Bu projede @sacquin_mo & @aysebercinb ve benim yönlendirmemle araştırma yapmak istiyorsanız, star.tubitak.gov.tr adresinden başvurunuzu vakit kaybetmeden tamamlayın 💪 Proje bilgileri için 👇 [Lütfen RT]
I am very much happy to share that our bilateral project application with @sacquin_mo has been co-funded by @Tubitak & @CampusFrance !! This funding will allow us to explore the impact of interface dynamics on the function of protein-protein complexes in the next two years 💪
In October, the wonderful @IrinaBezsonova created a PDB artwork each day as part of #inktober2023. We are delighted to share all these artworks, descriptions and PDB entry links on our #PDBart project pages. 👇View all the artworks👇 ebi.ac.uk/pdbe/inktober-…
We still feel the motivational energy we got from being with all these great minds in one of the most impressive ancient cities of the world, Ephesus ❤️ Co-organized by @amjjbonvin & @arneelof, this event was possible thanks to the generous support from @EMBO ...
For those that are curious, the experimental notebook demo-ed at the workshop can be found here: 🤓 colab.research.google.com/github/sokrypt…
Today's hands-on session with @sokrypton and @arneelof on AF2 in ColabFold was eye-opening! 🚀 Attendees got a sneak peek of Colab[Design]Fold's upcoming version, where you can edit MSA, templates, and view cool post-analysis outputs. Stay tuned! ✨ #EMBOIntegModelling23 @EMBO
We are also still energized by the amazing week we went through! 🚀 It is an honor and a source of pride that our flag 🇹🇷 is part of this crazy challenge! For all your kind words and shares, we would like to express our heartfelt thanks to you on behalf of the Karaca Lab team. ✨
With my 🧠 still at #EMBOIntegModelling23, I would like to share a #LightDock tutorial we prepared for the occasion, a crazy challenge on how to model the 🇹🇷 flag with molecules! Not so biologically correct, but still fun 😄 👉🏻 lightdock.org/workshops/embo…
With my 🧠 still at #EMBOIntegModelling23, I would like to share a #LightDock tutorial we prepared for the occasion, a crazy challenge on how to model the 🇹🇷 flag with molecules! Not so biologically correct, but still fun 😄 👉🏻 lightdock.org/workshops/embo…
Our workshop has become great thanks to your contributions! We are extremely happy to have spent this wonderful week together! We learned so much from everyone, which gave us plenty of energy & new ideas to work on🙏 These feelings will stay with us for a long time 🙌 Thank you!
Heading home again from #EMBOIntegModelling23 What a great workshop. Only minor complaint is that @Ezgi_Karaca_ and her team 💪 raised the bar so high for workshop organisation that it makes the rest of us look bad 😉 Hoping for #EMBOIntegModelling25 🤩 🙏
The night that you wouldn't think that it would have happened without this 👇🏻 #EMBOIntegmodelling23 @EMBO_YIP
Heading home again from #EMBOIntegModelling23 What a great workshop. Only minor complaint is that @Ezgi_Karaca_ and her team 💪 raised the bar so high for workshop organisation that it makes the rest of us look bad 😉 Hoping for #EMBOIntegModelling25 🤩 🙏
Off to #EMBOIntegModelling23 in Izmir 🇹🇷. Perfect place to talk about integrative modelling of disordered and flexible proteins
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