Blueprint
@blueprint_euBLUEPRINT - a BLUEPRINT of Haematopoietic Epigenomes - is a large-scale FP7 research project receiving close to 30 million euro funding from the EU.
Similar User
@OliverStegle
@Nucleosome_Bot
@CEEHRC
@EpiExperts
@StatGenomics
@QMULepigenetics
@epigenie
@generegulation
@EpgntxEinstein
@bbglab
@epigenetichulk
@Epigenomes
@wolfgangkhuber
@ludicroce
@danielrico_bio
@blueprint_eu the gift that keeps on giving after more than ten years from its inception
Do genetic risk variants for psychiatric disorders implicate immune cells? 🌟Yes!🌟"Genetic variants associated with psychiatric disorders are enriched at epigenetically active sites in lymphoid cells" out now in @NatureComms nature.com/articles/s4146…
New #compubio @ImdeaAlimenta work in collaboration with Anke K Bergmann (MHH) @blueprint_eu An epigenomic description of T-LGL pediatric leukemia identifiying BCL11B as a potential biomarker @BioMedCentral Leaded by Patricia Johansson & @teresa__laguna …lepigeneticsjournal.biomedcentral.com/articles/10.11…
Great to see that @blueprint_eu teams are still publishing about data generated within this Eu project. Congrats @nicolesoranzo @BiolaMJavierre and others
Do genetic risk variants for psychiatric disorders implicate immune cells? 🌟Yes!🌟"Genetic variants associated with psychiatric disorders are enriched at epigenetically active sites in lymphoid cells" out now in @NatureComms nature.com/articles/s4146…
We adapted the excellent @blueprint_eu policies created by @PaulFlicek and others into a "Policy for processing data access requests". Following some changes by the @UHN_Research Genomics Data Access Committee, we deposited the final policy on @ZENODO_ORG doi.org/10.5281/zenodo…
Interesting paper on communicating epigenetics to the public.
Do genetic risk variants for psychiatric disorders implicate immune cells? 🌟Yes!🌟"Genetic variants associated with psychiatric disorders are enriched at epigenetically active sites in lymphoid cells" out now in @NatureComms nature.com/articles/s4146…
Another contribution to science by the evergreen @blueprint_eu dataset. Great work @BrancoLab
Impressive talk by Ozgen Deniz (@BrancoLab) studying oncogenic cis-regulatory activity of HERV LTRs in AML using epigenomics profiling and editing! nature.com/articles/s4146… #cshlTE20
Interested to learn more? Find the full 10-year strategy to implement cell-based #interceptivemedicine in #Europe in the #LifeTimeSRA ➡️bit.ly/3m0ONP6
Ambitious perspective for #Europe: #LifeTimeInitiative & improving #European #healthcare through cell-based #interceptivemedicine Out in @Nature today!!! nature.com/articles/s4158…
A9. 4/(b) Controlled-access data (through @EGAarchive or dbGaP) with a data access policy that maximizes access to the data for responsible researchers. The @blueprint_eu project's guidelines is a good example. #ASHGtalksData blueprint-epigenome.eu/index.cfm?p=B5…
Great collaboration with @guilbourque and colleagues using @blueprint_eu data
1/3 New finding! Up to 5% of chip-seq peaks change if we use a personalized or graph genome. See below for a figure showing a peak found only using a graph genome. genomebiology.biomedcentral.com/articles/10.11…
#Ensembl100 💯 brings a new interface for configuration of multidimensional trackhubs, such as @blueprint_eu! Here’s how to use it: buff.ly/2Yjbc0v #trackhub #opendata
Good to see the long lasting collaborations of @nicolesoranzo and @GuigoLab resulting from @blueprint_eu Also a nice reminder of first annual meeting we had @CRGenomica
Always a pleasure to visit beautiful @CRGenomica and to see friends. Thank you @GuigoLab for fabulous hospitality @blueprint_eu @anavinuela @arnsbr
Great to see that the @blueprint_eu data continue to being used. Thank you @kousikbioinfo and @Soranzoteam !
Here we extend the evaluation of regulatory QTLs generated as part of the @blueprint_eu project (Chen et al., Cell, 2016) to systematically map molecular mechanisms and causal variants at 12 different immune-mediated diseases with publicly-available summary statistics. 3/15
Great job of all people involved @Kate_Sci, @luigra1, @Ciavenasc, @laurastephen, @PaulFlicek, @henkstun and many other members from @blueprint_eu
Here we extend the evaluation of regulatory QTLs generated as part of the @blueprint_eu project (Chen et al., Cell, 2016) to systematically map molecular mechanisms and causal variants at 12 different immune-mediated diseases with publicly-available summary statistics. 3/15
Great to see this publication in @NatureComms from former @blueprint_eu members @idibaps
A new paper together with our collaborators at @idibaps @hospitalclinic, integrating #CLL #Genetics and #epigenetic information, is now out in @NatureComms Funding @blueprint_eu @bloodwise_uk @CRUKresearch nature.com/articles/s4146…
Congratulations to @nicolesoranzo, partner of @blueprint_eu for being elected new member of @EMBO!
(eg @blueprint_eu), #European postdocs and students (eg @LoryBomb @d__vuckovic @lisalyliton @kmw1000 @manueltard), #European visiting students (eg @macsx82), and the #European scientific community at large. I hope that the UK community can find a way to continue
I will talk about the blueprint data analysis portal to exploit @blueprint_eu data by non bioinformaticians blueprint-data.bsc.es/release_2016-0…
And this afternoon talking about the huge work done by @blueprint_eu colleagues and the potential of data reuse. With focus in our work @Alfons_Valencia @danielrico_bio @VeraPancaldi @david_de_juan @JMFernand3z @SimoneEcker @vdelatorrelabs Felipe Were
And onThursday talking about the @blueprint_eu project and our work on it invited by @navarrabiomed and @ONCONET_SUDOE onconetmbcb.eu
New software package from some of our IHEC and @blueprint_eu PIs: "RnBeads 2.0: comprehensive analysis of DNA methylation data" - Fabian Müller et al @GenomeBiology genomebiology.biomedcentral.com/articles/10.11…
More on neutrophil genetics from us at @SoranzoT + collaborators @mikhailspivakov amongst others. A profile of haematopoietic TF, PU.1 in primary neuts from ~100 individuals from the @blueprint_eu variation panel, combined with promoter capture HiC biorxiv.org/content/10.110…
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Who to follow
-
Oliver Stegle
@OliverStegle -
Nucleosome papers 📚 NucPosDB database
@Nucleosome_Bot -
Canadian Epigenetics
@CEEHRC -
E3 Engaging Epigenetics Experts
@EpiExperts -
Stegle Lab
@StatGenomics -
@qmulepigenetics
@QMULepigenetics -
EpiGenie
@epigenie -
Gene Regulation
@generegulation -
Center for Epigenomics, Einstein
@EpgntxEinstein -
bbglab
@bbglab -
Epigenetic Hulk
@epigenetichulk -
Epigenomes MDPI
@Epigenomes -
Wolfgang Huber 🇺🇦
@wolfgangkhuber -
Luciano Di Croce
@ludicroce -
Daniel Rico
@danielrico_bio
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