Zhe Xue 薛者
@Zhe_Xue_DLPhD student at Dept Zoology, Cambridge. MSc Bioinformatics Graduate from UCPH. How to pronounce my name: dge-uh (dge as in edge)
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PSA, since I've now seen problems arising from this: As of Sept 2023, GATK no longer makes missing genotypes explicit in VCFs (i.e. "./." as in the VCF spec). Missing genotypes are instead coded as "0/0" with a DP=0 format field. See attached for examples.
Zhe Xue from @Cambridge_Uni @CamZoology on detecting environmental drivers of speciation in leopards #smbe23 #smbe2023
I've shared tons of free and inexpensive material for learning machine learning. Combined, their value is easily greater than a $145,092 machine learning degree. Here are the best ones:
If Darwin went on his voyage of the Beagle today his research would've ended with a t-SNE of the bird specimens that he collected instead of a theory of evolution
I have open PhD & postdoc positions for developing new models to combine genomic, archaeological & environmental data to trace spatiotemporal mobility in ancient Eurasia, as part of #COREX @ERC_Research Deadline Nov 5: jobportal.ku.dk/phd/?show=1547… employment.ku.dk/faculty/?show=…
#newpaper! 🚨🚨 @RobertMBeyer et al. analyse how #climate shaped early human #migrations in the last 300k years, opening a few "windows" to allow the #outofAfrica nature.com/articles/s4146… 🧵below, 1/n
🔔Please share! We have 2 open #postdoc positions at @CamZoology: local adaptation in space and time (software) jobs.cam.ac.uk/job/30698/ local adaptation in humans (data analysis) jobs.cam.ac.uk/job/30697/. PI: @DrManica #AcademicTwitter #job #jobalert
What comes first, the hypothesis or the dataset?
#Newpreprint! Maisano Delser et al. #Climate and #mountains shaped human ancestral genetic lineages os now out in @biorxivpreprint doi.org/10.1101/2021.0… #popgen #outofAfrica #humangenomics #ancientDNA A thread 1/7
Hi, on our next CIGENE seminar (21st April 2021, 12:00 in Oslo), we will be welcoming Fernando Racimo @FerRacimo! Title: Dynamic and descriptive models for spatiotemporal population genomics cigene.no/cigene-seminar…
CNN coverage of our paper on the population genomics of the Viking world, including a lively reenactment of the results by Ashot and Eske. Congrats to @ashotmarg2004, @siko76, Dan Lawson and the rest of the team! edition.cnn.com/2020/09/16/eur… @LFGeoGenetics
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