Changzhi Wang
@WChangzhiA bioinformatic PhD candidate in @WDRC_KAUST. Working on bioinformatics+AMR in the group of @EnvMicroSafety. Alumni of @SUSTechSZ @UMNAlumni
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HEY HEY #AMR people, the argNorm preprint is now available on @QUT ePrints: eprints.qut.edu.au/252448 We* designed a tool for normalizing ARG annotations across currently popular tools and databases. * @svetlana_up @VedanthRamji @HuiChong6 @cocodyq @FinlayM @luispedrocoelho 1/6
Did you know that BLAST searches used to be done by email?! I went down quite the rabbit hole for this video: youtu.be/imXQDiIsyjA
🚨 New Report Released! 🚨 We’re thrilled to announce that the Global AMR R&D Hub, in partnership with @WHO, has just published the 2024 G7 Progress Report: Incentivising the Development of New Antibacterial Treatments. 📢 📖 Read the full report here: globalamrhub.org/publications/i…
A reminder - if you’re using 🦤 radEmu 🦤 for differential abundance and have suggestions or questions, we’d love to hear from you! 💻📈 We *love* this method - and it’s here to stay - so let us know what you need via GitHub issues! Online docs ICYMI: statdivlab.github.io/radEmu/article…
Delighted to share a new publication that I co-first-authored with @ivaglj1va and @Michelleofseas as part of the @MicrobialPlanet project where we discuss an open-source framework for collaborative computational microbiology called the Digital Microbe: nature.com/articles/s4159…
pinfish-Tools to annotate genomes using long read transcriptomics data github.com/nanoporetech/p…
[Self promotion warning] Really happy to see our paper on air sequencing for agricultural pathogen surveillance published - a collaboration with @matholomoo @michaelgiolai @NHM_Science @EarlhamInst Paul Nicholson @JohnInnesCentre cell.com/current-biolog…
New default BLAST nt database coming in August 👍 ncbiinsights.ncbi.nlm.nih.gov/2024/07/18/new…
Awesome talk by @vivek_mutalik - stacking plates upon plates to help us understand what phages are doing 🙏#VoM2024
We found that pneumococci struggle to develop resistance to the cyclic lipopeptide viscosin. Exploring less toxic derivatives may unveil promising new antimicrobials. @Morten3891 @biocath journals.asm.org/doi/10.1128/sp…
The extent and characteristics of DNA transfer between plasmids and chromosomes by @DaganLab in @CurrentBiology @CellPressNews cell.com/current-biolog…
Check out our latest preprint! This work was lead by @NicolasKieffe13 with the support of the whole MBA lab, especially @alberto_hca . If you are interested in the intersection between #Phage resistance and #AMR pull the thread! 🧵 biorxiv.org/content/10.110…
Dear Plasmid enthusiasts… Is there a software/tool to estimate the volume/physical size of a plasmid in its supercoiled state simply based on its sequence? I am aware of such tools to look into protein folding, but not for circular DNA molecules…
Really nice review paper regarding WBE: Advances in Wastewater-Based Epidemiology in the ES&T Family of Journals | Environmental Science & Technology Letters pubs.acs.org/doi/full/10.10…
Had a great time on #ISFEV in Tokyo. Presented two of my Ph.D. works to audiences, meeting a lot of fantastic people and impressive works. Thanks for the opportunity and looking forward to meeting you for the next time!
Call for abstracts!! Australian Future Sensing Conference, 27-29 Nov, 2024, in Melbourne CBD. If you work in the #diagnostics, #biosensing, or #sensing research fields and/or industry, this is for you. Abstracts open, click here: australianfuturesensing.net
Good advice from @Nature about barplots -- as you get ready for #ASMmicrobe #ASMmicrobe2024 "If the number of [observations] is less [5], show the actual measurements rather than error bars." 💯😻 nature.com/articles/ncb06…
In our new paper at Cell (@CellCellPress), we reveal secrets of how the third form of life, archaea, make energy. We uncover new lineages of hydrogen-using enzymes, both minimal and complex. These help archaea thrive in all sorts of extreme environments. sciencedirect.com/science/articl…
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