@UCDProteomics Profile picture

Brett Phinney

@UCDProteomics

Director: UC Davis Genome Center Proteomics Core. Analyzer of weird samples . Proteomics Radio Hour crooner. Currently twitterpated

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If anyone's interested we made about 20 proteomics videos/lectures/tutorials mainly for grad students post-docs etc interested in proteomics video.ucdavis.edu/playlist/detai…


Brett Phinney Reposted

A podcast made by generative AI using an input of our recent general proteomics overview paper - and its shockingly good 🤯🤯🤯🤯 the future is here Link to the podcast: notebooklm.google.com/notebook/714d7… link to paper: pubs.acs.org/doi/full/10.10… HT @neely615 @UCDProteomics

I used @neely615 suggestion of googles notebook lm to make an ai podcast and fed it @J_my_sci great jessegmeyerlab.github.io/proteomics-tut… This is what popped out . Kind of amazing !! notebooklm.google.com/notebook/714d7…



Brett Phinney Reposted

Don't forget to register for this upcoming hybrid seminar, join us Nov 6 at 10am-12pm either on Zoom or in-person at GBSF, Auditorium.

Nov 6: Join our guest lecture seminar featuring two great speakers! Prof. Worsnop on organics in aerosols at 10am, and Prof. Kuo is focused on pharmaceutical analysis. Hybrid event. Join here: ucdavis.zoom.us/meeting/regist… #Lipidomics #Metabolomics #Aerosols

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This was a little reels video we made for the @genomecenter Halloween symposium this year. Btw we do know what RNA is , but it was too fragile and got cut 😉 instagram.com/reel/DBkPiC0y7…


Brett Phinney Reposted

Seems like a good time for a list some of my favorite truly #OpenSource #proteomics tools. In no particular order: 1. Comet - The Sequest algorithm for everyone. github.com/uwpr/comet


Brett Phinney Reposted

DIA-NN 1.9.2 is out! There are some major improvements, please check the release notes github.com/vdemichev/DiaN…


These 2 I consider required reading. I have read them over 2-3 dozen times over the last decade or 2 . yes I'm old now. I didn't used to be. how did that happen? ionsource.com/tutorial/isoto… ionsource.com/Card/calculate…

Like most (except maybe the new kids?), I didn't take a formal course on proteomics until later (post-doc?). In the meantime this old website was gold. Never said thank you to Andrew Guzzetta (actually didn't even know that was the author), but THANKS! ionsource.com



Way to go Thermo , another fine example of packaging. You know people with degrees in packaging do exist, maybe you should think about hiring some of them ? . admissions.msu.edu/academics/majo…

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Received this with my evotips today. I wish I had a cute very tiny wizard in the lab! I feel like I’d pat his head for good luck , but he would always be grumpy because something was always broken

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I almost never analyze SILAC samples anymore. Is it becoming less popular? Anyway I was really impressed with using the latest version of Fragpipe -w/ skyline integration for dda and Spectronaut 19 for DIA.

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Brett Phinney Reposted

New podcast drop! In episode 3 of this @us_hupo sponsored series @neely615 and I tried to get to the bottom of "What Proteomics is Not" with the one and only @r_l_moritz open.spotify.com/episode/6oEX5R… - Spoiler - proteomics is a lot of things!


Brett Phinney Reposted

USHUPO members look for a QR code to sign up for a ushupo chat group. We will use this group to arrange a meet up in Dresden.


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