Adrien Schahl
@AdrienSchahlDr, #CompChem 🖥️, MD of proteins, polysaccharides and lipids in @DelemotteLab. @Matth_Chavent and @jppiquem Labs Alumni.
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We have an open research assistant position in host-pathogen interactions. Are you interested in synthetic biology, membranes and microorganisms, please apply! ki.varbi.com/what:job/jobID…
Great news! Grateful that we recieved 4.4 million SEK from @Vetenskapsradet to study the sequence dependence of transcription factor - DNA binding: vr.se/english/applyi… There is also 11 days left to apply to this Postdoc position in my lab. Apply: scilifelab.se/career/postdoc…
New work on protein design... 🚨S2 immunogen design using advanced simulation @WestpaSoftware WE MD--> opening mechanism--> design--> stabilized protein--> cryoEM structure + immunology @xandra_nuqui @LCasalino88 @McLellan_Lab @ChandranLab nature.com/articles/s4146…
And here is the preprint: biorxiv.org/content/10.110… We used charge scaling / electronic continuum correction to study ion permeation in potassium channels. Big thanks and congratulations to all authors: @4SPQutXMsAXsPzJ who spearheaded the work, @_Reinier and Bert @CompBioPhys
Teaser of our most recent manuscript, preprint in a few days! :) #potassiumispurple #kchannels #directknockon
This is now published in @JPhysChem ! 🥳 @CbiToulouse @IpbsToulouse @CNRS_Toulouse @CNRSbiologie pubs.acs.org/doi/10.1021/ac…
New preprint from a nice collaboration between the @IpbsToulouse Integrative Biological NMR team and my lab ( LMGM @CbiToulouse ): "Coarse-graining the recognition of a glycolipid by the C-type lectin Mincle receptor " spearheaded by @noriegamaxime biorxiv.org/content/10.110…
This article from @JustinLemkulVT of @vtbiochem provides updated tutorials for the GROMACS software. Users are presented with several common applications in simulating protein dynamics, with an emphasis on robustness and cautions against common pitfalls. go.acs.org/b3y
Are you interested in doing postdoctoral work in the intersection of advanced MD, machine learning and software development in collaboration with the GROMACS team? Last chance to apply this weekend! kth.se/lediga-jobb/74…
"da_tracker" is out ! Our workflow for quantitative single cell and single bacterium/phagosome tracking is now published and still available for you to try. Please reach out if you need assistance for installing the tools and running it. journals.biologists.com/bio/article/13…
SciLifeLab PULSE: an International Postdoctoral Program Empowering Future Leaders in Life Sciences! We have received a funding invitation from @MSCActions COFUND (@HorizonEU) for a 5-year postdoc program. 9 impl. partners & 24 associated (see image). scilifelab.se/news/scilifela…
#compchem and finally, the stuning "Spike" #SARSCoV2 artwork of @blazhynska made it to the inside back cover @ChemicalScience!!! Support @ERC_Research (project EMC2) doi.org/10.1039/D4SC04…
#compchem Just published in @ChemicalScience: Water-Glycan Interactions Drive the SARS-CoV-2 Spike Dynamics: Insights into Glycan-Gate Control and Camouflage Mechanism. dx.doi.org/10.1039/D4SC04… Towards developing therapeutic strategies against #COVID19, we performed μs-long…
We have a 2+ years EU funded postdoc position with @pierrepo based in Paris to extend this project. Position can start beginning of 2025. Answer to this tweet if interested or contact me or @pierrepo
Our MDverse paper is now published in its final form in @eLife ! 🥳 It was a great collab & lot of fun to work with @pierrepo and @j0kaso 🙏 @eriklindahl , @LindorffLarsen , @DelemotteLab , @baam93 and co! doi.org/10.7554/eLife.…
My guest in today's episode 18 of the Phase Space Invaders #podcast is Erik Lindahl @eriklindahl! Listen on Spotify or any other podcast platform. In the conversation, Erik highlights the need to think deeply about the questions in #biology that we're after, and to find the…
We have updated the preprint about PENSA, our analysis software library for biomolecular conformational ensembles, e.g., from molecular dynamics simulations: arxiv.org/abs/2212.02714
Excited to announce that my PhD research has been published! Check out my latest paper on the role of cation-π interactions in lipid extraction by PCTP/STARD2 in JPhysChemLetters. Thank you for all the support! @reuter_nathalie @MahmoudMoqadam @JPhysChem bit.ly/4fApvTy
Reactive Martini applied to simulate ring formation inside condensates. Great work from @csbrasnett in collaboration with the @OttoLab Published in Comm. Chem. rdcu.be/dMF8N
Our single particle profiler is now more accessible! If you have a confocal microscope, you can study the content and properties of single particles thanks to the open and freely available single particle profiler (with easy GUI).👇 for detailed thread biorxiv.org/content/10.110…
We continue development of our Single Particle Profiler and now we make it more accessible for users who do not have FCS modality on their microscopes. biorxiv.org/content/10.110… A thread🧵
I wrote a piece for this issue of Microbiology Today! I got to reflect on the rise of AI and what we need to consider going forward 🖥️ You can check it out here 👇
In The Promise and Perils of Generative AI article, @chelseabrowncg discusses AI's benefits and pitfalls. Brown also warns that while AI helps with understanding biological data, it can be biased and potentially harmful - microb.io/45h3Jj8 #MicrobiologyToday
Congratulations to @rutika90 on her first author publication in JCIM! Supporting authors @augustinec0339 and @PhuKhanhTang! #compchem @GC_CUNY @GC_BiochemPhD pubs.acs.org/doi/10.1021/ac…
Curvature Footprints of Transmembrane Proteins in Simulations with the Martini Force Field | The Journal of Physical Chemistry B pubs.acs.org/doi/10.1021/ac…
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