Marc T. K. Nielsen
@marcmtkMD. Microbiology. Rstats
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The first three to come and ask in person get my abstract reviewer coffee vouchers. At poster P3276. #ECCMID2024 / #ESCMIDGlobal and we can discuss prospective rutine WGS of health care associated bacteraemia!
@ESGEM_ESCMID is launching a working group to develop standards for interpreting #AMR genotypes. Much like EUCAST guidance for interpreting lab phenotypes as S/I/R, we want to define the #AMRrules for interpreting genotypes. #ESCMIDGlobal2024
GLG member @UKAMREnvoy urges @ESCMID researchers, clinicians & scientists to engage policymakers & parliamentarians for specific actions on #AMR aligning with the GLG recommendations to ensure concrete outcomes at the #UNGA HLM on AMR in Sept. #ECCMID2024 bit.ly/3UozJwK
3rd try with corrected date 🤦♂️ #IDTwitter ECCMID meetup Sat April 27 8 pm til ? Fàbrica Moritz Barcelona maps.app.goo.gl/qoDbUxpRnu4NhX…
Here is Hybracter, our tool for generating automated hybrid & long-read-only bacterial genome assemblies. @rrwick @viji112 @BhavyaPapudeshi @BeardyMcFace @JuddLmj @Gh72938 Github: github.com/gbouras13/hybr… Docs: hybracter.readthedocs.io/en/latest/ Preprint: biorxiv.org/content/10.110… 🧵1/11
#Nordtick2024 has begun and we are so proud to welcome more than 160 colleagues from 19 countries to Denmark. Check out the program at nordtick2024.com @Klinisk_Mikro
Important discussion. If you use #BioRender you have a problem with copyright,even with pro license. Many other options for making #graphicalAbstracts at zero costs, e.g. with Bioicons, Health icons, SVGrepo, @FlatIcons, @fontawesome ... How-to: journals.plos.org/ploscompbiol/a…
I have explicit confirmation from Biorender that CC BY was not okay without explicit written permission obtained by writing to a specific non public email address. As of November 2023 no CC BY at all possible anymore.
Great stuff @ESCMID, love the rebranding effort SEVENTEEN DAYS BEFORE THE CONFERENCE. This could not have waited until 1st May, and don’t let anyone tell you otherwise! #ECCMID2024 is now #ESCMIDGlobal
ESCMID modernises its branding and communications. Our congress ECCMID becomes "ESCMID Global". For more information visit our website: ow.ly/oGUi50Rc8oi #ECCMID2024 is now #ESCMIDGlobal
#IDTwitter 📢 Please take & then share🔁 Please take our research survey on the practice of follow up blood cultures in patients with gram-negative bacteremia Bonus: see how your practice compares to others duke.qualtrics.com/jfe/form/SV_8x…
For today's grand finale, we drew inspiration from Dikembe Mutombo for some new #antimicrobialstewardship strategies. *We can neither confirm nor deny that antimicrobial stewardship will save you 15% on car insurance.* #USAAW23 #WAAW2023 #WAAW
🆕️⚡️⚡️🟢Narrative review @CMIJournal Dr.Jacob Bodilsen The author of the upcoming @ESCMID Brain abscess guidelines The primary investigator of ORAL (brain abscess POET like ) Early switch to oral antimicrobials in brain abscess H/t @TakaMatsuo_ID @Inox94 clinicalmicrobiologyandinfection.com/article/S1198-…
#JustPublished! @WHO_Europe/@ECDC_EU joint report: #AntimicrobialResistance threatens patient safety in the European Region. "We see high percentages of resistance to last-line #antibiotics, such as #carbapenems in several countries of the region." bit.ly/3GS0ofp #AMR
Cool thread on TSV from CLI below. If you have never tried, also give a go to visidata.org; it's mind-blowing
New blog post! rrwick.github.io/2023/04/19/vie… I deal with a lot of tab-delimited data in bioinformatics, so I recently spent some time putting together Bash functions for viewing them on the command line. Might be useful to others! (1/5)
Come join us @id_austin @CAAR_Aus -as a clinical research fellow in #drugallergy #antibioticallergy #immunology. 6m or 12m block. Would suit an ID trainee or allergy/immunology trainee/fellow. Great team & opportunity! International 🌎welcome! Pls retweet seek.com.au/job/66618971?t…
Anyone at #ECCMID2023 who want to hear the incredible microbehunter who discovered the source of this outbreak, should head to Hall P tomorrow morning at 8:30 to hear Charlotte Nielsen Agergaard tell the story
What a story Gram positive active antibiotic tablets contaminated with gram negative bacteria.. #ECCMID23 #ECCMID2023
This RCT - 39 ICUs in 6 hospitals, LMICs in Asia; ~11,000 patients screened, 460 in ITT ; overall lowish ICU mortality; intervention did reduce Abx duration; overall shorter duration was non-inferior based on 60-day mortality and recurrence
Urinary tract course in 63%. E.Coli and Klebsiella=2 most common pathogens 30% in the oral group used coamoxyclav RESULTS mITT population primary outcome (Rx failure) 25.6% oral versus 21.7% IV (-16.5% to 9.2%) thus concluded non-inferiority.
Off to #ECCMID23 for 4 intense days of Clinical Microbiology, Infections Diseases and Infection Prevention. Looking forward to learning tons.
Excited to be nominated as an official "Twitter Ambassador" for #ECCMID2023 in Copenhagen. Let the tweets fly!
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